Vanity of vanities

Kei Koba in CER, Kyoto University, Japan

papers to read

Aboveground herbivores drive stronger plant species-specific feedback than belowground fungi to regulate tree community assembly

Aboveground herbivores drive stronger plant species-specific feedback than belowground fungi to regulate tree community assembly Kohmei Kadowaki, Satoshi Yamamoto, Hirotoshi Sato, Akifumi S. Tanabe & Hirokazu Toju Oecologia link.springer.c…

Altitudinal differentiation in the leaf wax-mediated flowering bud protection against frost in a perennial Arabidopsis

Altitudinal differentiation in the leaf wax-mediated flowering bud protection against frost in a perennial Arabidopsis Genki Yumoto, Yuko Sasaki-Sekimoto, Biva Aryal, Hiroyuki Ohta & Hiroshi Kudoh Oecologia link.springer.com

Measuring nitrogen fixation by the acetylene reduction assay (ARA): is 3 the magic ratio?

Measuring nitrogen fixation by the acetylene reduction assay (ARA): is 3 the magic ratio? Fiona M. Soper, Camille Simon, Verena Jauss Biogeochemistry link.springer.com

Beyond nitrogen: phosphorus – estimating the minimum niche dimensionality for resource competition between phytoplankton

Beyond nitrogen: phosphorus – estimating the minimum niche dimensionality for resource competition between phytoplankton Peter Hofmann, Adam Clark, Petra Hoffmann, Antonis Chatzinotas, W. Stanley Harpole, Susanne Dunker Ecology Letters onl…

A Metabolic Perspective of Stochastic Community Assembly

A Metabolic Perspective of Stochastic Community Assembly Victor S. Saito, Daniel M. Perkins, Pavel Kratina Trends in Ecology & Evolution www.sciencedirect.com

Recovery of freshwater microbial communities after extreme rain events is mediated by cyclic succession

Recovery of freshwater microbial communities after extreme rain events is mediated by cyclic succession Tanja Shabarova, Michaela M. Salcher, Petr Porcal, Petr Znachor, Jiří Nedoma, Hans-Peter Grossart, Jaromír Seďa, Josef Hejzlar & Karel …

International Forum on Advanced Environmental Sciences and Technology (iFAST)

really, really nice. So helpful. I learned a lot from each lecture. Must see. www.ou.edu

Spatial heterogeneity in nitrification and soil exploration by trees favour source‐sink dynamics in a humid savanna: a modeling approach

Spatial heterogeneity in nitrification and soil exploration by trees favour source‐sink dynamics in a humid savanna: a modeling approach Sarah Konaré Simon Boudsocq Jacques Gignoux Jean‐Christophe Lata Xavier Raynaud Sébastien Barot Functi…

A method for characterizing dissolved DNA and its application to the North Pacific Subtropical Gyre

A method for characterizing dissolved DNA and its application to the North Pacific Subtropical Gyre Morgan D. Linney Christopher R. Schvarcz Grieg F. Steward Edward F. DeLong David M. Karl Limnology and Oceanography: Methods aslopubs.onlin…

Nitrogen and the food system

Nitrogen and the food system Geneviève S. Metson, Abhishek Chaudhary, Xin Zhang, Benjamin Houlton, Azusa Oita, Nandula Raghuram, Quentin D. Read, Lex Bouwman, Hanqin Tian, Aimable Uwizeye, Alison J. Eagle One Earth www.sciencedirect.com

Learning the Art of Instrument Troubleshooting

Must read Learning the Art of Instrument Troubleshooting isotopequeen.blogspot.com

Amino acids and amino sugars as indicators of the source and degradation state of sedimentary organic matter

Amino acids and amino sugars as indicators of the source and degradation state of sedimentary organic matter Jin-E Wei, Yan Chen, Jian Wang, Shi-Bo Yan, Hong-Hai Zhang, Gui-Peng Yang, Marine Chemistry www.sciencedirect.com

Time to act–assessing variations in qPCR analyses in biological nitrogen removal with examples from partial nitritation/anammox systems

Time to act–assessing variations in qPCR analyses in biological nitrogen removal with examples from partial nitritation/anammox systems Shelesh Agrawal, David G. Weissbrodt, Medini Annavajhala, Marlene Mark Jensen, Jose Maria Carvajal Arro…

Advances in the characterization and monitoring of natural organic matter using spectroscopic approaches

Advances in the characterization and monitoring of natural organic matter using spectroscopic approaches Wei Chen, Han-Qing Yu Water resarch www.sciencedirect.com

Hydroxylamine and the nitrogen cycle: A review

Hydroxylamine and the nitrogen cycle: A review Aina Soler-Jofra, Julio Pérez, Mark C.M. van Loosdrecht Water Research doi.org

Advances towards understanding long chain fatty acids-induced inhibition and overcoming strategies for efficient anaerobic digestion process

Advances towards understanding long chain fatty acids-induced inhibition and overcoming strategies for efficient anaerobic digestion process Mohamed Elsamadony, Alsayed Mostafa, Manabu Fujii, Ahmed Tawfik, Deepak Pant Water Research www.sc…

Potential foraminiferal nitrate transport in sediments in contact with oxic overlying water

Potential foraminiferal nitrate transport in sediments in contact with oxic overlying water Zhaomeng Xu Sumei Liu Xiaoyan Ning Limnology and Oceanography aslopubs.onlinelibrary.wiley.com

Organic Matter Degradation across Ecosystem Boundaries: The Need for a Unified Conceptualization

Organic Matter Degradation across Ecosystem Boundaries: The Need for a Unified Conceptualization Dolly N. Kothawala, Anne M. Kellerman, Núria Catalán, Lars J. Tranvik Trends in Ecology & Evolution www.sciencedirect.com

Tracking, targeting, and conserving soil biodiversity

Tracking, targeting, and conserving soil biodiversity Carlos A. Guerra, Richard D. Bardgett, Lucrezia Caon, Thomas W. Crowther, Manuel Delgado-Baquerizo, Luca Montanarella, Laetitia M. Navarro, Alberto Orgiazzi, Brajesh K. Singh, Leho Tede…

Resilience of Tropical Ecosystems to Ocean Deoxygenation

Resilience of Tropical Ecosystems to Ocean Deoxygenation Andrew H. Altieri, Maggie D. Johnson, Sara D. Swaminathan, Hannah R. Nelson, Keryn B. Gedan Trends in Ecology & Evolution https://www.cell.com/trends/ecology-evolution/fulltext/S0169…

Adenosine triphosphate (ATP) as a metric of microbial biomass in aquatic systems: new simplified protocols, laboratory validation, and a reflection on data from the literature

Adenosine triphosphate (ATP) as a metric of microbial biomass in aquatic systems: new simplified protocols, laboratory validation, and a reflection on data from the literature Alexander B. Bochdansky Alison N. Stouffer NyJaee N. Washington…

Dissimilatory Nitrate Reduction to Ammonium (DNRA) and Denitrification Pathways Are Leveraged by Cyclic AMP Receptor Protein (CRP) Paralogues Based on Electron Donor/Acceptor Limitation in Shewanella loihica PV-4

Dissimilatory Nitrate Reduction to Ammonium (DNRA) and Denitrification Pathways Are Leveraged by Cyclic AMP Receptor Protein (CRP) Paralogues Based on Electron Donor/Acceptor Limitation in Shewanella loihica PV-4 Shuangyuan Liu, Jingcheng …

The initial inoculation ratio regulates bacterial coculture interactions and metabolic capacity

The initial inoculation ratio regulates bacterial coculture interactions and metabolic capacity Chun-Hui Gao, Hui Cao, Peng Cai & Søren J. Sørensen The ISME Journal https://doi.org/10.1038/s41396-020-00751-7

Denitrification kinetics indicates nitrous oxide uptake is unaffected by electron competition in Accumulibacter

Denitrification kinetics indicates nitrous oxide uptake is unaffected by electron competition in Accumulibacter Samarpita Roy, Pradhan Nirakar, N.G. How Yong, Wuertz Stefan Water Research click.notification.elsevier.com

安定同位体生態学関連論文情報(twitterに移行してみます)

これまでこの場所に"papers to read"というカテゴリーで文献紹介してましたが、特に安定同位体に関するものについては、twitterにて紹介することにしました。 IRMSの不調情報とともに(涙)、とりあえず試験的に始めています。COVID-19で情報がなんとなしに…

Novel trophic interactions under climate change promote alpine plant coexistence

Novel trophic interactions under climate change promote alpine plant coexistence Patrice Descombes, Camille Pitteloud, Gaëtan Glauser, Emmanuel Defossez, Alan Kergunteuil, Pierre-Marie Allard, Sergio Rasmann, Loïc Pellissier Science

Soil fungal mycelia have unexpectedly flexible stoichiometric C:N and C:P ratios

Soil fungal mycelia have unexpectedly flexible stoichiometric C:N and C:P ratios Tessa Camenzind Kay Philipp Grenz Johannes Lehmann Matthias C. Rillig Ecology Letters onlinelibrary.wiley.com

Southern Ocean upwelling, Earth’s obliquity, and glacial-interglacial atmospheric CO2 change

Southern Ocean upwelling, Earth’s obliquity, and glacial-interglacial atmospheric CO2 change Xuyuan E. Ai, Anja S. Studer, Daniel M. Sigman, Alfredo Martínez-García, François Fripiat, Lena M. Thöle, Elisabeth Michel, Julia Gottschalk, Laur…

Metagenomic water quality monitoring with a portable laboratory

Metagenomic water quality monitoring with a portable laboratory Kishor Acharya, Adrian Blackburn, Jemila Mohammed, Alemseged Tamiru Haile, Andualem Mekonnen Hiruy, David Werner Water Research

Parallel and non-parallel changes of the gut microbiota during trophic diversification in repeated young adaptive radiations of sympatric cichlid fish

Parallel and non-parallel changes of the gut microbiota during trophic diversification in repeated young adaptive radiations of sympatric cichlid fish Andreas Härer, Julián Torres-Dowdall, Sina J. Rometsch, Elizabeth Yohannes, Gonzalo Mach…

本拠地はこちら http://www.ecology.kyoto-u.ac.jp/~keikoba/