Vanity of vanities

Kei Koba in CER, Kyoto University, Japan

papers to read

Denitrification kinetics indicates nitrous oxide uptake is unaffected by electron competition in Accumulibacter

Denitrification kinetics indicates nitrous oxide uptake is unaffected by electron competition in Accumulibacter Samarpita Roy, Pradhan Nirakar, N.G. How Yong, Wuertz Stefan Water Research click.notification.elsevier.com

安定同位体生態学関連論文情報(twitterに移行してみます)

これまでこの場所に"papers to read"というカテゴリーで文献紹介してましたが、特に安定同位体に関するものについては、twitterにて紹介することにしました。 IRMSの不調情報とともに(涙)、とりあえず試験的に始めています。COVID-19で情報がなんとなしに…

Novel trophic interactions under climate change promote alpine plant coexistence

Novel trophic interactions under climate change promote alpine plant coexistence Patrice Descombes, Camille Pitteloud, Gaëtan Glauser, Emmanuel Defossez, Alan Kergunteuil, Pierre-Marie Allard, Sergio Rasmann, Loïc Pellissier Science

Soil fungal mycelia have unexpectedly flexible stoichiometric C:N and C:P ratios

Soil fungal mycelia have unexpectedly flexible stoichiometric C:N and C:P ratios Tessa Camenzind Kay Philipp Grenz Johannes Lehmann Matthias C. Rillig Ecology Letters onlinelibrary.wiley.com

Southern Ocean upwelling, Earth’s obliquity, and glacial-interglacial atmospheric CO2 change

Southern Ocean upwelling, Earth’s obliquity, and glacial-interglacial atmospheric CO2 change Xuyuan E. Ai, Anja S. Studer, Daniel M. Sigman, Alfredo Martínez-García, François Fripiat, Lena M. Thöle, Elisabeth Michel, Julia Gottschalk, Laur…

Metagenomic water quality monitoring with a portable laboratory

Metagenomic water quality monitoring with a portable laboratory Kishor Acharya, Adrian Blackburn, Jemila Mohammed, Alemseged Tamiru Haile, Andualem Mekonnen Hiruy, David Werner Water Research

Parallel and non-parallel changes of the gut microbiota during trophic diversification in repeated young adaptive radiations of sympatric cichlid fish

Parallel and non-parallel changes of the gut microbiota during trophic diversification in repeated young adaptive radiations of sympatric cichlid fish Andreas Härer, Julián Torres-Dowdall, Sina J. Rometsch, Elizabeth Yohannes, Gonzalo Mach…

Global diversity of microbial communities in marine sediment

Global diversity of microbial communities in marine sediment Tatsuhiko Hoshino, Hideyuki Doi, Go-Ichiro Uramoto, Lars Wörmer, Rishi R. Adhikari, Nan Xiao, Yuki Morono, Steven D’Hondt, Kai-Uwe Hinrichs, and Fumio Inagaki PNAS

Measurement of the Potential Rates of Dissimilatory Nitrate Reduction to Ammonium Based on 14NH4+/15NH4+ Analyses via Sequential Conversion to N2O

Measurement of the Potential Rates of Dissimilatory Nitrate Reduction to Ammonium Based on 14NH4+/15NH4+ Analyses via Sequential Conversion to N2O Megumi Kuroiwa, Keitaro Fukushima, Kazuma Hashimoto, Yukiko Senga, Tsubasa Sato, Chie Katsuy…

Energy Flow Through Marine Ecosystems: Confronting Transfer Efficiency

Energy Flow Through Marine Ecosystems: Confronting Transfer Efficiency Tyler D. Eddy, Joey R. Bernhardt, Julia L. Blanchard, William W.L. Cheung, Mathieu Colléter, Hubert du Pontavice, Elizabeth A. Fulton, Didier Gascuel, Kelly A. Kearney,…

Microbial necromass on the rise: The growing focus on its role in soil organic matter development

Microbial necromass on the rise: The growing focus on its role in soil organic matter development Chao Liang,Matthias Kästner,Rainer Georg Joergensen SBB https://doi.org/10.1016/j.soilbio.2020.108000 So impressive.

第98回全日本選手権大会

課外活動がほんの1ヶ月前に緩和され、なんとか船に乗れるようになった、、、という状態からしたら信じられない状態ではないかと思う。2000m漕げるだけでも実際の所、驚愕のレベルだと思う。皆さんお疲れ様。気をつけて帰るように。 しかし、、、いや、全日本…

Trophic Interactions and the Drivers of Microbial Community Assembly

Trophic Interactions and the Drivers of Microbial Community Assembly Matti Gralka, Rachel Szabo, Roman Stocker, Otto X. Cordero Current Biology doi.org So interesting!

A new insight into isotopic fractionation associated with decarboxylation in organisms: implications for amino acid isotope approaches in biogeoscience

A new insight into isotopic fractionation associated with decarboxylation in organisms: implications for amino acid isotope approaches in biogeoscience Yuko Takizawa, Yoshinori Takano, Bohyung Choi, Prarthana S. Dharampal, Shawn A. Steffan…

Coupling of green and brown food webs and ecosystem stability

Coupling of green and brown food webs and ecosystem stability Akihiko Mougi Ecology and Evolution https://doi.org/10.1002/ece3.6586

Trophic niche similarities of sympatric Turdus thrushes determined by fecal contents, stable isotopes, and bipartite network approaches

Trophic niche similarities of sympatric Turdus thrushes determined by fecal contents, stable isotopes, and bipartite network approaches Camila Bosenbecker, Leandro Bugoni Ecology and Evolution https://doi.org/10.1002/ece3.6485

Animal body size distribution influences the ratios of nutrients supplied to plants

Animal body size distribution influences the ratios of nutrients supplied to plants Elizabeth le Roux, Laura S. van Veenhuisen, Graham I. H. Kerley, Joris P. G. M. Cromsigt PNAS www.pnas.org

Compound-specific δ2H analysis highlights the relationship between direct assimilation and de novo synthesis of amino acids from food and water in a terrestrial mammalian omnivore

Compound-specific δ2H analysis highlights the relationship between direct assimilation and de novo synthesis of amino acids from food and water in a terrestrial mammalian omnivore Seth D. Newsome, Bobby J. Nakamoto, Mauriel Rodriguez Curra…

Reconstructing continental‐scale variation in soil δ15N: a machine learning approach in South America

Reconstructing continental‐scale variation in soil δ15N: a machine learning approach in South America João Paulo Sena‐Souza, Benjamin Z. Houlton, Luiz Antônio Martinelli, Gabriela Bielefeld Nardoto Ecosphere https://doi.org/10.1002/ecs2.32…

Valuation of coral reefs in Japan: Willingness to pay for conservation and the effect of information

www.chikyu.ac.jp Valuation of coral reefs in Japan: Willingness to pay for conservation and the effect of information Kohei Imamura, Kohei Takenaka Takano, Naoki H. Kumagai, Yumi Yoshida, Hiroya Yamano, Masahiko Fujii, Tohru Nakashizuka, S…

The bounded rationality of probability distortion

The bounded rationality of probability distortion Hang Zhang,Xiangjuan Ren, and Laurence T. Maloney PNAS https://doi.org/10.1073/pnas.1922401117

isoverse

isoverse https://www.isoverse.org/ open-source data tools for stable isotopes

Predictive biology: modelling, understanding and harnessing microbial complexity

Predictive biology: modelling, understanding and harnessing microbial complexity. Lopatkin, A.J., Collins, J.J. Nature Reviews Microbiology https://doi.org/10.1038/s41579-020-0372-5

Nutritional constraints on brain evolution: sodium and nitrogen limit brain size

Nutritional constraints on brain evolution: sodium and nitrogen limit brain size Emilie C. Snell‐Rood Eli M. Swanson Anne Espeset Sarah Jaumann Kinsey Philips Courtney Weaver Brandon Semke Akira S Mori Gerhard Boenisch Jens Kattge Eric W. …

Constraining the atmospheric OCS budget from sulfur isotopes

Constraining the atmospheric OCS budget from sulfur isotopes Shohei Hattori, Kazuki Kamezaki, and Naohiro Yoshida PNAS https://www.pnas.org/content/early/2020/08/04/2007260117 Hattori-san told me that this paper is "hommage" of Yoshida & T…

Stable isotopes in hair reveal dietary protein sources with links to socioeconomic status and health

Stable isotopes in hair reveal dietary protein sources with links to socioeconomic status and health James R. Ehleringer, Stephannie Covarrubias Avalos, Brett J. Tipple, Luciano O. Valenzuela, and Thure E. Cerling PNAS www.pnas.org So inte…

Microbial material cycling, energetic constraints and ecosystem expansion in subsurface ecosystems

Microbial material cycling, energetic constraints and ecosystem expansion in subsurface ecosystems Mayumi Seto and Yoh Iwasa Proceedings of the Royal Society B: Biological Sciences https://royalsocietypublishing.org/doi/full/10.1098/rspb.2…

Upper Midwest lakes are supersaturated with N2

Upper Midwest lakes are supersaturated with N2 Brianna M. Loeks-Johnson and James B. Cotner PNAS https://www.pnas.org/content/117/29/17063.abstract?etoc

Selective carbon sources influence the end products of microbial nitrate respiration

Selective carbon sources influence the end products of microbial nitrate respiration Hans K. Carlson, Lauren M. Lui, Morgan N. Price, Alexey E. Kazakov, Alex V. Carr, Jennifer V. Kuehl, Trenton K. Owens, Torben Nielsen, Adam P. Arkin & Ada…

Global Nitrogen Cycle: Critical Enzymes, Organisms, and Processes for Nitrogen Budgets and Dynamics

Global Nitrogen Cycle: Critical Enzymes, Organisms, and Processes for Nitrogen Budgets and Dynamics Xinning Zhang, Bess B. Ward, and Daniel M. Sigman Chemical Reviews https://pubs.acs.org/doi/10.1021/acs.chemrev.9b00613

本拠地はこちら http://www.ecology.kyoto-u.ac.jp/~keikoba/